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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9621566 chr22:33187010 C/T C22orf46 chr22:42084943-42094140:+ -0.75 -6.93 1.38E-11 Box Plot
THCA rs9621566 chr22:33187010 C/T CABIN1 chr22:24407642-24574596:+ -0.53 -6.49 2.21E-10 Box Plot
THCA rs9621566 chr22:33187010 C/T CBY1 chr22:39052641-39069859:+ -0.52 -6.5 2.08E-10 Box Plot
THCA rs9621566 chr22:33187010 C/T DDT chr22:24313554-24322660:- -0.44 -6.18 1.41E-9 Box Plot
THCA rs9621566 chr22:33187010 C/T DDX17 chr22:38879445-38903665:- -0.46 -6.17 1.43E-9 Box Plot
THCA rs9621566 chr22:33187010 C/T DRG1 chr22:31795509-31926620:+ -0.65 -7.67 9.67E-14 Box Plot
THCA rs9621566 chr22:33187010 C/T EIF3D chr22:36906897-36925483:- -0.51 -6.25 9.17E-10 Box Plot
THCA rs9621566 chr22:33187010 C/T EIF3L chr22:38244875-38285414:+ -0.55 -6.02 3.41E-9 Box Plot
THCA rs9621566 chr22:33187010 C/T EIF4ENIF1 chr22:31832963-31892094:- -0.59 -6.42 3.23E-10 Box Plot
THCA rs9621566 chr22:33187010 C/T EP300 chr22:41487790-41576083:+ -0.43 -6.61 1.05E-10 Box Plot
THCA rs9621566 chr22:33187010 C/T FAM10A4 chr13:50746154-50747749:+ -0.53 -6.18 1.39E-9 Box Plot
THCA rs9621566 chr22:33187010 C/T GGA1 chr22:38004482-38029571:+ -0.53 -6.3 6.81E-10 Box Plot
THCA rs9621566 chr22:33187010 C/T HPS4 chr22:26839389-26879803:- -0.54 -5.91 6.4E-9 Box Plot
THCA rs9621566 chr22:33187010 C/T HSCB chr22:29138019-29153503:+ -0.48 -6.04 3.12E-9 Box Plot
THCA rs9621566 chr22:33187010 C/T KLHL22 chr22:20795806-20850170:- -0.55 -6.33 5.58E-10 Box Plot